EnhancerDB
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  3. rs115135714[chr1:235110539]
Enhancers that have rs115135714[chr1:235110539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115135714[chr1:235110539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235110458 235111182 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402089
chr1 235110458 235111182 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884957
chr1 235110519 235111029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21402090
chr1 235110519 235111029 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107884958
chr1 235110521 235110542 IRF1 JASPAR yes 36337002
chr1 235110525 235110540 PRDM1 JASPAR yes 36337003
chr1 235110527 235110548 IRF1 JASPAR yes 36337005
chr1 235110527 235110548 ZNF263 JASPAR yes 36337006
chr1 235110532 235110550 RARA JASPAR yes 36337008
chr1 235110534 235110547 SCRT2 JASPAR yes 36337009
Genes associated with rs115135714[chr1:235110539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More