EnhancerDB
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  3. rs115141743[chr12:106530227]
Enhancers that have rs115141743[chr12:106530227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106512365 106532655 enh29959
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr12 106529993 106530447 vista14758
VISTA
Transcript factors that have rs115141743[chr12:106530227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106529820 106530396 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108055964
chr12 106529829 106530369 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108055965
chr12 106529848 106530504 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108055966
chr12 106529968 106530368 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055967
chr12 106529969 106530565 CTCF UCSC Txn Factor no Conserved 108055968
chr12 106529970 106530306 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21570211
chr12 106529970 106530306 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108055969
chr12 106529975 106530331 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108055970
chr12 106529975 106530335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055971
chr12 106529982 106530286 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21570212
chr12 106529982 106530286 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108055972
chr12 106529982 106530302 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055973
chr12 106529990 106530330 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21570213
chr12 106529990 106530330 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108055974
chr12 106529991 106530281 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21570214
chr12 106529991 106530281 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108055975
chr12 106529993 106530357 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108055976
chr12 106529994 106530284 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108055977
chr12 106530001 106530271 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21570215
chr12 106530001 106530271 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108055978
chr12 106530001 106530287 SMC3 UCSC Txn Factor no Conserved 108055979
chr12 106530008 106530265 RAD21 UCSC Txn Factor no Conserved 108055980
chr12 106530009 106530279 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055981
chr12 106530014 106530304 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055982
chr12 106530017 106530287 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108055983
chr12 106530018 106530288 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21570216
chr12 106530018 106530288 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108055984
chr12 106530021 106530249 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21570217
chr12 106530021 106530249 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108055985
chr12 106530025 106530255 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108055986
chr12 106530034 106530227 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21570218
chr12 106530034 106530227 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108055987
chr12 106530034 106530264 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21570219
chr12 106530034 106530264 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108055988
chr12 106530040 106530242 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21570220
chr12 106530040 106530242 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108055989
chr12 106530040 106530290 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21570221
chr12 106530040 106530290 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108055990
chr12 106530047 106530240 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108055992
chr12 106530055 106530233 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108055993
chr12 106530212 106530227 PRDM1 JASPAR yes 82470677
chr12 106530212 106530227 PRDM1 JASPAR yes 123493694
chr12 106530212 106530230 IRF2 JASPAR yes 82470678
chr12 106530212 106530230 IRF2 JASPAR yes 123493695
chr12 106530222 106530227 SP1 TRANSFAC yes 82470679
chr12 106530222 106530227 SP1 TRANSFAC yes 123493696
Genes associated with rs115141743[chr12:106530227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More