EnhancerDB
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  3. rs115208248[chr17:55549555]
Enhancers that have rs115208248[chr17:55549555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115208248[chr17:55549555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55549550 55549560 GSC2 JASPAR yes 54958608
chr17 55549550 55549560 GSC JASPAR yes 54958609
chr17 55549551 55549559 RHOXF1 JASPAR yes 54958610
chr17 55549551 55549560 PITX3 JASPAR yes 54958611
Genes associated with rs115208248[chr17:55549555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More