EnhancerDB
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  3. rs115229246[chr1:90375062]
Enhancers that have rs115229246[chr1:90375062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90347765 90388035 enh484
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115229246[chr1:90375062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90374437 90375087 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813846
chr1 90374560 90375100 EP300 UCSC Txn Factor no Conserved 107813852
chr1 90374560 90375100 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107813853
chr1 90374573 90375089 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813854
chr1 90374577 90375107 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107813855
chr1 90375050 90375064 SPIC JASPAR yes 30633333
chr1 90375055 90375062 PEA3 TRANSFAC yes 30633334
Genes associated with rs115229246[chr1:90375062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More