EnhancerDB
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  3. rs115229472[chr1:173382378]
Enhancers that have rs115229472[chr1:173382378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs115229472[chr1:173382378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173381948 173382538 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846679
chr1 173382173 173383654 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846680
chr1 173382173 173383663 POLR2A UCSC Txn Factor no Conserved 107846681
chr1 173382205 173382615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846682
chr1 173382255 173382691 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846683
chr1 173382281 173382691 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846684
chr1 173382318 173382594 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846685
chr1 173382338 173382718 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846686
chr1 173382351 173382735 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846687
chr1 173382374 173382634 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846688
chr1 173382377 173382381 LFA1 TRANSFAC yes 33197049
Genes associated with rs115229472[chr1:173382378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More