EnhancerDB
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  3. rs115346599[chr12:125180649]
Enhancers that have rs115346599[chr12:125180649]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115346599[chr12:125180649]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125180337 125180857 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21581795
chr12 125180388 125180792 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581796
chr12 125180429 125180948 ZNF143 GTRD no Epithelial (MCF-7) 21581797
chr12 125180438 125180782 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21581798
chr12 125180439 125180798 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21581799
chr12 125180466 125180754 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21581800
chr12 125180474 125180761 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21581801
chr12 125180480 125180744 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21581802
chr12 125180484 125180726 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581803
chr12 125180488 125180733 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21581804
chr12 125180492 125180731 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21581805
chr12 125180492 125180732 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21581806
chr12 125180505 125180749 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21581807
chr12 125180640 125180660 TP63 JASPAR yes 124410042
Genes associated with rs115346599[chr12:125180649], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More