EnhancerDB
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  3. rs115388540[chr1:8177622]
Enhancers that have rs115388540[chr1:8177622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs115388540[chr1:8177622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8177616 8177630 EBF1 JASPAR yes 26515141
chr1 8177616 8177630 GLIS2 JASPAR yes 26515142
Genes associated with rs115388540[chr1:8177622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More