EnhancerDB
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  3. rs115415995[chr1:235124074]
Enhancers that have rs115415995[chr1:235124074]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115415995[chr1:235124074]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235123646 235124169 ZNF274 GTRD no Liver (HepG2) 21402694
chr1 235123706 235124116 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402695
chr1 235124050 235124354 TCF7L2 GTRD no Colon (HCT116) 21402697
chr1 235124074 235124080 LEF1 TRANSFAC yes 36338942
chr1 235124074 235124080 SOX10 JASPAR yes 36338943
Genes associated with rs115415995[chr1:235124074], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More