EnhancerDB
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  3. rs115425268[chr19:2641662]
Enhancers that have rs115425268[chr19:2641662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115425268[chr19:2641662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2641648 2641662 SPI1 JASPAR yes 112088300
chr19 2641648 2641669 IRF1 JASPAR yes 112088301
chr19 2641651 2641666 FOXP1 JASPAR yes 112088302
chr19 2641653 2641668 FOXP1 JASPAR yes 112088303
chr19 2641654 2641669 FOXP1 JASPAR yes 112088304
chr19 2641654 2641669 MEF2C JASPAR yes 112088305
chr19 2641654 2641675 IRF1 JASPAR yes 112088306
chr19 2641656 2641671 FOXP1 JASPAR yes 112088307
chr19 2641660 2641675 FOXP1 JASPAR yes 112088308
chr19 2641660 2641681 IRF1 JASPAR yes 112088309
chr19 2641662 2641677 PRDM1 JASPAR yes 112088310
Genes associated with rs115425268[chr19:2641662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More