EnhancerDB
  1. Home
  2. SNP
  3. rs115485035[chr16:88844229]
Enhancers that have rs115485035[chr16:88844229]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115485035[chr16:88844229]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 21736969
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223440
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223441
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223442
chr16 88836531 88844706 TCF7L2 GTRD no Colon (HCT116) 108223443
chr16 88844226 88844241 TFAP2C JASPAR yes 12303337
chr16 88844228 88844234 SP1 TRANSFAC yes 12303338
chr16 88844228 88844241 TFAP2A JASPAR yes 12303339
chr16 88844228 88844241 TFAP2B JASPAR yes 12303340
chr16 88844228 88844241 TFAP2C JASPAR yes 12303341
chr16 88844229 88844240 EBF1 JASPAR yes 12303342
Genes associated with rs115485035[chr16:88844229], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More