EnhancerDB
  1. Home
  2. SNP
  3. rs115490125[chr5:172216649]
Enhancers that have rs115490125[chr5:172216649]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115490125[chr5:172216649]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172215982 172216943 POLR2A UCSC Txn Factor no Conserved 108537503
chr5 172216644 172216649 TFAP2A TRANSFAC yes 67827151
chr5 172216644 172216650 MZF1 JASPAR yes 67827152
chr5 172216646 172216651 ETS2 TRANSFAC yes 67827153
Genes associated with rs115490125[chr5:172216649], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More