EnhancerDB
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Enhancers that have rs115490868[chr1:204256086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204255998 204256379 vista4676
VISTA
Transcript factors that have rs115490868[chr1:204256086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204255780 204256309 ZNF143 GTRD no Epithelial (MCF-7) 21370359
chr1 204255780 204256309 ZNF143 GTRD no Epithelial (MCF-7) 107859800
chr1 204255965 204256435 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370360
chr1 204255965 204256435 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859801
chr1 204255965 204256675 GATA3 UCSC Txn Factor no Conserved 107859802
chr1 204255972 204256522 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859803
chr1 204255972 204256659 GATA2 UCSC Txn Factor no Conserved 107859804
chr1 204256013 204256669 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370361
chr1 204256013 204256669 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859805
chr1 204256017 204256207 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370362
chr1 204256017 204256207 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859806
chr1 204256065 204256086 IRF1 JASPAR yes 34688419
chr1 204256065 204256086 IRF1 JASPAR yes 118437730
chr1 204256071 204256086 FOXA1 JASPAR yes 34688422
chr1 204256071 204256086 FOXA1 JASPAR yes 118437733
chr1 204256075 204256086 FOXA1 JASPAR yes 34688423
chr1 204256075 204256086 FOXA1 JASPAR yes 118437734
chr1 204256079 204256091 TFAP2B JASPAR yes 34688424
chr1 204256079 204256091 TFAP2C JASPAR yes 34688425
chr1 204256079 204256091 TFAP2B JASPAR yes 118437735
chr1 204256079 204256091 TFAP2C JASPAR yes 118437736
chr1 204256085 204256104 REST JASPAR yes 34688426
chr1 204256085 204256104 REST JASPAR yes 118437737
chr1 204256086 204256090 LFA1 TRANSFAC yes 34688427
chr1 204256086 204256090 LFA1 TRANSFAC yes 118437738
Genes associated with rs115490868[chr1:204256086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More