EnhancerDB
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  3. rs115506809[chr17:80498249]
Enhancers that have rs115506809[chr17:80498249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115506809[chr17:80498249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80498238 80498256 IRF2 JASPAR yes 56372284
chr17 80498239 80498260 IRF1 JASPAR yes 56372285
chr17 80498241 80498256 PRDM1 JASPAR yes 56372286
chr17 80498241 80498256 STAT2 JASPAR yes 56372287
chr17 80498242 80498256 STAT1 JASPAR yes 56372288
chr17 80498243 80498255 IRF1 JASPAR yes 56372289
chr17 80498243 80498257 IRF7 JASPAR yes 56372290
Genes associated with rs115506809[chr17:80498249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More