EnhancerDB
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  3. rs115545256[chr17:55540364]
Enhancers that have rs115545256[chr17:55540364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115545256[chr17:55540364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55539307 55541179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773526
chr17 55539307 55541179 POLR2A UCSC Txn Factor no Conserved 108274069
chr17 55539307 55541179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274070
chr17 55540178 55540742 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773527
chr17 55540178 55540742 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274071
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 21773528
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 108274072
chr17 55540274 55541310 ZBTB33 GTRD no Lung (A549) 21773529
chr17 55540274 55541310 ZBTB33 GTRD no Lung (A549) 108274073
chr17 55540287 55540787 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773530
chr17 55540287 55540787 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274074
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 21773531
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 108274075
chr17 55540322 55541084 ZBTB33 GTRD no Lung (A549) 21773532
chr17 55540322 55541084 ZBTB33 GTRD no Lung (A549) 108274076
chr17 55540328 55541147 ZBTB33 GTRD no Lung (A549) 21773533
chr17 55540328 55541147 ZBTB33 GTRD no Lung (A549) 108274077
chr17 55540354 55540374 PPARG JASPAR yes 54957398
chr17 55540355 55540375 PPARG JASPAR yes 54957399
chr17 55540361 55540371 SP1 JASPAR yes 54957401
Genes associated with rs115545256[chr17:55540364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More