EnhancerDB
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  3. rs115545838[chr1:39659505]
Enhancers that have rs115545838[chr1:39659505]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115545838[chr1:39659505]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39659501 39659522 IRF1 JASPAR yes 28265535
chr1 39659502 39659523 IRF1 JASPAR yes 28265536
chr1 39659503 39659518 STAT2 JASPAR yes 28265537
Genes associated with rs115545838[chr1:39659505], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More