EnhancerDB
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  3. rs115626540[chr16:85251511]
Enhancers that have rs115626540[chr16:85251511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115626540[chr16:85251511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85250697 85255346 ZNF143 GTRD no Epithelial (MCF-7) 21721380
chr16 85250729 85251659 ZNF143 GTRD no Epithelial (MCF-7) 21721382
chr16 85250729 85254668 ZNF143 GTRD no Epithelial (MCF-7) 21721383
chr16 85250756 85255120 ZNF143 GTRD no Epithelial (MCF-7) 21721384
chr16 85250777 85255302 TCF7L2 GTRD no Colon (HCT116) 21721386
chr16 85250808 85251629 ZNF274 GTRD no Bone Marrow (K562) 21721387
chr16 85250865 85251583 ZNF274 GTRD no Bone Marrow (K562) 21721388
chr16 85250897 85252465 ZNF143 GTRD no Epithelial (MCF-7) 21721389
chr16 85250978 85255439 TCF7L2 GTRD no Colon (HCT116) 21721391
chr16 85251016 85252541 TCF7L2 GTRD no Colon (HCT116) 21721393
chr16 85251037 85251914 TCF7L2 GTRD no Colon (HCT116) 21721395
chr16 85251093 85251515 ZNF143 GTRD no Epithelial (MCF-7) 21721396
chr16 85251134 85255621 TCF7L2 GTRD no Colon (HCT116) 21721398
chr16 85251316 85251887 TCF7L2 GTRD no Colon (HCT116) 21721400
chr16 85251375 85251928 TCF7L2 GTRD no Colon (HCT116) 21721401
chr16 85251498 85251512 ONECUT3 JASPAR yes 12034063
chr16 85251509 85251521 MEF2A JASPAR yes 12034065
chr16 85251509 85251521 MEF2D JASPAR yes 12034066
chr16 85251510 85251520 MEF2A JASPAR yes 12034067
chr16 85251511 85251519 FOXL1 JASPAR yes 12034068
Genes associated with rs115626540[chr16:85251511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More