EnhancerDB
  1. Home
  2. SNP
  3. rs115670467[chr6:13428782]
Enhancers that have rs115670467[chr6:13428782]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13417125 13443009 enh8962
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Muscle (Myotube) Lung Muscle (A673) Heart
chr6 13428547 13428865 vista50956
VISTA
Transcript factors that have rs115670467[chr6:13428782]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13427953 13428867 NFIC UCSC Txn Factor no Conserved 108538597
chr6 13427977 13428828 RUNX3 UCSC Txn Factor no Conserved 108538598
chr6 13428412 13428875 CTCF UCSC Txn Factor no Conserved 108538601
chr6 13428770 13428784 PLAG1 JASPAR yes 70315993
chr6 13428770 13428784 PLAG1 JASPAR yes 100029622
chr6 13428772 13428785 EOMES JASPAR yes 70315994
chr6 13428772 13428785 EOMES JASPAR yes 100029623
chr6 13428774 13428784 TBR1 JASPAR yes 70315995
chr6 13428774 13428784 TBR1 JASPAR yes 100029624
chr6 13428774 13428785 TBX20 JASPAR yes 70315996
chr6 13428774 13428785 TBX2 JASPAR yes 70315997
chr6 13428774 13428785 TBX20 JASPAR yes 100029625
chr6 13428774 13428785 TBX2 JASPAR yes 100029626
chr6 13428775 13428785 TBX21 JASPAR yes 70315998
chr6 13428775 13428785 TBX21 JASPAR yes 100029627
chr6 13428776 13428784 MGA JASPAR yes 70315999
chr6 13428776 13428784 TBX15 JASPAR yes 70316000
chr6 13428776 13428784 TBX1 JASPAR yes 70316001
chr6 13428776 13428784 TBX4 JASPAR yes 70316002
chr6 13428776 13428784 TBX5 JASPAR yes 70316003
chr6 13428776 13428784 MGA JASPAR yes 100029628
chr6 13428776 13428784 TBX15 JASPAR yes 100029629
chr6 13428776 13428784 TBX1 JASPAR yes 100029630
chr6 13428776 13428784 TBX4 JASPAR yes 100029631
chr6 13428776 13428784 TBX5 JASPAR yes 100029632
Genes associated with rs115670467[chr6:13428782], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More