EnhancerDB
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  3. rs115716794[chr2:232527347]
Enhancers that have rs115716794[chr2:232527347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 232527256 232532109 vista1014
VISTA
Transcript factors that have rs115716794[chr2:232527347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232526530 232527637 E2F1 UCSC Txn Factor no Conserved 107690829
chr2 232526530 232527637 E2F1 UCSC Txn Factor no Conserved 108435710
chr2 232526546 232528057 POLR2A UCSC Txn Factor no Conserved 107690830
chr2 232526546 232528057 POLR2A UCSC Txn Factor no Conserved 108435711
chr2 232526624 232527548 YY1 UCSC Txn Factor no Conserved 107690831
chr2 232526624 232527548 YY1 UCSC Txn Factor no Conserved 108435712
chr2 232526654 232527398 TAF1 UCSC Txn Factor no Conserved 107690832
chr2 232526654 232527398 TAF1 UCSC Txn Factor no Conserved 108435714
chr2 232526736 232527361 E2F6 UCSC Txn Factor no Conserved 107690833
chr2 232526736 232527361 E2F6 UCSC Txn Factor no Conserved 108435715
chr2 232526811 232527443 REST UCSC Txn Factor no Conserved 107690834
chr2 232526811 232527443 REST UCSC Txn Factor no Conserved 108435716
chr2 232526838 232527764 GABPA UCSC Txn Factor no Conserved 107690835
chr2 232526838 232527764 GABPA UCSC Txn Factor no Conserved 108435717
chr2 232527042 232527478 ELF1 UCSC Txn Factor no Conserved 107690838
chr2 232527042 232527478 ELF1 UCSC Txn Factor no Conserved 108435723
chr2 232527190 232527437 SRF UCSC Txn Factor no Conserved 107690840
chr2 232527190 232527437 SRF UCSC Txn Factor no Conserved 108435725
Genes associated with rs115716794[chr2:232527347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More