EnhancerDB
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  3. rs115720646[chr12:46604529]
Enhancers that have rs115720646[chr12:46604529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs115720646[chr12:46604529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 21541049
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 108026928
chr12 46604528 46604540 INSM1 JASPAR yes 120603569
Genes associated with rs115720646[chr12:46604529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 47469490 47473734 - AMIGO2 ENSG00000139211.5 47473734 864961 Uterus 0.0190014 11978