EnhancerDB
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  3. rs11576829[chr1:168453337]
Enhancers that have rs11576829[chr1:168453337]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs11576829[chr1:168453337]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168453332 168453346 RXRB JASPAR yes 32930729
chr1 168453332 168453346 RXRG JASPAR yes 32930730
Genes associated with rs11576829[chr1:168453337], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 169074935 169101960 + ATP1B1 ENSG00000143153.8 169074935 621598 Liver 0.315361 1544