EnhancerDB
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  3. rs11577317[chr1:43992893]
Enhancers that have rs11577317[chr1:43992893]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs11577317[chr1:43992893]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43992885 43992897 TAL1 JASPAR yes 28502628
chr1 43992885 43992904 CTCF JASPAR yes 28502629
chr1 43992886 43992896 MAX JASPAR yes 28502630
chr1 43992886 43992897 USF1 JASPAR yes 28502631
chr1 43992886 43992897 USF2 JASPAR yes 28502632
chr1 43992887 43992897 NEUROD2 JASPAR yes 28502633
Genes associated with rs11577317[chr1:43992893], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 43990858 44089343 + PTPRF ENSG00000142949.12 43990858 0 Adrenal 9.81076e-05 606