EnhancerDB
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  3. rs115778228[chr1:235127329]
Enhancers that have rs115778228[chr1:235127329]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115778228[chr1:235127329]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402704
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 21402705
chr1 235125488 235130598 ZNF274 GTRD no Bone Marrow (K562) 107885433
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402706
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 21402707
chr1 235125514 235131335 ZNF274 GTRD no Bone Marrow (K562) 107885434
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 21402712
chr1 235125954 235129911 ZNF274 GTRD no Bone Marrow (K562) 107885438
chr1 235126665 235129439 ZNF274 GTRD no Bone Marrow (K562) 21402717
chr1 235126686 235129470 ZNF274 GTRD no Bone Marrow (K562) 21402718
chr1 235126727 235129486 ZNF274 GTRD no Blood (GM12878) 21402721
chr1 235126732 235127946 ZNF274 GTRD no Bone Marrow (K562) 21402722
chr1 235126742 235131363 ZNF274 GTRD no Liver (HepG2) 21402723
chr1 235126742 235131363 ZNF274 GTRD no Liver (HepG2) 21402724
chr1 235126787 235129500 ZNF274 GTRD no Bone Marrow (K562) 21402725
chr1 235126804 235131348 ZNF274 GTRD no Blood (GM12878) 21402726
chr1 235126804 235131348 ZNF274 GTRD no Blood (GM12878) 21402727
chr1 235126868 235129485 ZNF274 GTRD no Cervix (HeLa-S3) 21402728
chr1 235126883 235129499 ZNF274 GTRD no Bone Marrow (K562) 21402730
chr1 235126888 235127444 ZNF274 GTRD no Liver (HepG2) 21402731
chr1 235126944 235128156 ZNF143 GTRD no Epithelial (MCF-7) 21402732
chr1 235126962 235131260 ZNF274 GTRD no Liver (HepG2) 21402733
chr1 235126962 235131260 ZNF274 GTRD no Liver (HepG2) 21402734
chr1 235126965 235129440 ZNF274 GTRD no Blood (GM12878) 21402735
chr1 235126966 235127427 ZNF274 GTRD no Bone Marrow (K562) 21402736
chr1 235126974 235129378 ZNF274 GTRD no Bone Marrow (K562) 21402737
chr1 235127013 235127580 ZNF143 GTRD no Epithelial (MCF-7) 21402738
chr1 235127046 235127597 ZNF274 GTRD no Bone Marrow (K562) 21402739
chr1 235127055 235127720 ZNF274 GTRD no Liver (HepG2) 21402741
chr1 235127115 235127555 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402742
chr1 235127130 235127572 ZNF143 GTRD no Epithelial (MCF-7) 21402743
chr1 235127215 235130524 ZNF274 GTRD no Blood (GM12878) 21402744
chr1 235127215 235130524 ZNF274 GTRD no Blood (GM12878) 21402745
chr1 235127245 235129265 ZNF274 GTRD no Bone Marrow (K562) 21402746
chr1 235127291 235130554 ZNF274 GTRD no Liver (HepG2) 21402747
chr1 235127291 235130554 ZNF274 GTRD no Liver (HepG2) 21402748
chr1 235127320 235127331 NFE2 JASPAR yes 36339379
chr1 235127321 235127330 JDP2 JASPAR yes 36339380
Genes associated with rs115778228[chr1:235127329], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More