EnhancerDB
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  3. rs115780550[chr17:2746589]
Enhancers that have rs115780550[chr17:2746589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115780550[chr17:2746589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2746572 2746593 IRF1 JASPAR yes 52776033
chr17 2746574 2746589 PRDM1 JASPAR yes 52776034
chr17 2746574 2746589 STAT2 JASPAR yes 52776035
chr17 2746576 2746590 SPIC JASPAR yes 52776036
chr17 2746578 2746599 IRF1 JASPAR yes 52776037
chr17 2746580 2746595 PRDM1 JASPAR yes 52776038
chr17 2746582 2746597 FOXP1 JASPAR yes 52776039
chr17 2746583 2746598 FOXP1 JASPAR yes 52776040
chr17 2746584 2746599 FOXP1 JASPAR yes 52776041
chr17 2746585 2746600 FOXP1 JASPAR yes 52776042
chr17 2746586 2746601 FOXP1 JASPAR yes 52776043
chr17 2746587 2746602 FOXP1 JASPAR yes 52776044
Genes associated with rs115780550[chr17:2746589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More