EnhancerDB
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  3. rs115827249[chr12:65063471]
Enhancers that have rs115827249[chr12:65063471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115827249[chr12:65063471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65062886 65063546 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552885
chr12 65062886 65063546 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041894
chr12 65062919 65063509 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552886
chr12 65062919 65063509 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041895
chr12 65063255 65063751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552887
chr12 65063255 65063751 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041896
chr12 65063261 65063701 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552888
chr12 65063261 65063701 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041897
chr12 65063293 65063729 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552889
chr12 65063293 65063729 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041898
chr12 65063320 65063644 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21552890
chr12 65063320 65063644 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108041899
chr12 65063362 65063606 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108041900
chr12 65063389 65063619 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21552891
chr12 65063389 65063619 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108041901
chr12 65063458 65063477 PAX5 JASPAR yes 121423972
chr12 65063461 65063598 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552892
chr12 65063461 65063598 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041902
Genes associated with rs115827249[chr12:65063471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More