EnhancerDB
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  3. rs11586436[chr1:19754938]
Enhancers that have rs11586436[chr1:19754938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11586436[chr1:19754938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19754920 19754941 IRF1 JASPAR yes 27188902
chr1 19754921 19754942 IRF1 JASPAR yes 27188904
chr1 19754922 19754943 IRF1 JASPAR yes 27188905
chr1 19754937 19754949 YY1 JASPAR yes 27188907
Genes associated with rs11586436[chr1:19754938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More