EnhancerDB
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  3. rs115879397[chr1:19763131]
Enhancers that have rs115879397[chr1:19763131]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115879397[chr1:19763131]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19763126 19763142 NFYA JASPAR yes 27190005
chr1 19763131 19763135 H1TF2 TRANSFAC yes 27190006
chr1 19763131 19763135 NFE TRANSFAC yes 27190007
chr1 19763131 19763135 SRF TRANSFAC yes 27190008
Genes associated with rs115879397[chr1:19763131], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More