EnhancerDB
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  3. rs11588617[chr1:173377554]
Enhancers that have rs11588617[chr1:173377554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs11588617[chr1:173377554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173377538 173377554 POU4F3 JASPAR yes 33196301
chr1 173377540 173377554 POU4F1 JASPAR yes 33196307
chr1 173377540 173377555 HNF1A JASPAR yes 33196308
chr1 173377541 173377554 HNF1B JASPAR yes 33196309
chr1 173377541 173377555 POU4F1 JASPAR yes 33196310
chr1 173377541 173377557 POU4F2 JASPAR yes 33196311
chr1 173377541 173377557 POU4F3 JASPAR yes 33196312
chr1 173377545 173377559 ONECUT1 JASPAR yes 33196313
chr1 173377545 173377559 ONECUT2 JASPAR yes 33196314
chr1 173377545 173377559 ONECUT3 JASPAR yes 33196315
chr1 173377546 173377556 PAX3 JASPAR yes 33196316
chr1 173377546 173377556 PAX7 JASPAR yes 33196317
chr1 173377548 173377560 PBX1 JASPAR yes 33196318
chr1 173377549 173377563 ONECUT1 JASPAR yes 33196319
chr1 173377549 173377563 ONECUT2 JASPAR yes 33196320
chr1 173377549 173377563 ONECUT3 JASPAR yes 33196321
chr1 173377549 173377565 POU4F3 JASPAR yes 33196322
chr1 173377550 173377560 CUX1 JASPAR yes 33196323
chr1 173377550 173377560 CUX2 JASPAR yes 33196324
chr1 173377550 173377560 PAX3 JASPAR yes 33196325
chr1 173377550 173377560 PAX7 JASPAR yes 33196326
Genes associated with rs11588617[chr1:173377554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More