EnhancerDB
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  3. rs115900452[chr17:55996532]
Enhancers that have rs115900452[chr17:55996532]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115900452[chr17:55996532]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55996528 55996540 FOXC2 JASPAR yes 54999284
chr17 55996529 55996540 FOXC1 JASPAR yes 54999285
chr17 55996530 55996541 FOXA1 JASPAR yes 54999286
Genes associated with rs115900452[chr17:55996532], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More