EnhancerDB
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  3. rs11590874[chr1:19797195]
Enhancers that have rs11590874[chr1:19797195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11590874[chr1:19797195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19797184 19797196 TFAP2A JASPAR yes 27195017
chr1 19797188 19797197 THAP1 JASPAR yes 27195018
chr1 19797188 19797203 HNF4G JASPAR yes 27195019
chr1 19797191 19797195 LFA1 TRANSFAC yes 27195020
Genes associated with rs11590874[chr1:19797195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More