EnhancerDB
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  3. rs115928839[chr16:88848093]
Enhancers that have rs115928839[chr16:88848093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115928839[chr16:88848093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 21737173
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223690
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223691
chr16 88847121 88849037 TCF7L2 GTRD no Colon (HCT116) 108223692
chr16 88847171 88848094 TCF7L2 GTRD no Colon (HCT116) 21737174
chr16 88847171 88848094 TCF7L2 GTRD no Colon (HCT116) 108223693
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 21737175
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223694
chr16 88847194 88848450 ZNF143 GTRD no Epithelial (MCF-7) 108223695
chr16 88847402 88848432 ZNF143 GTRD no Epithelial (MCF-7) 21737179
chr16 88847402 88848432 ZNF143 GTRD no Epithelial (MCF-7) 108223699
chr16 88847402 88848432 ZNF143 GTRD no Epithelial (MCF-7) 108223700
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223701
chr16 88847410 88848589 MYC UCSC Txn Factor no Conserved 108223702
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 21737182
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223705
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223706
chr16 88847474 88849274 TCF7L2 GTRD no Colon (HCT116) 108223707
chr16 88847510 88848096 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737185
chr16 88847510 88848096 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223710
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 21737190
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 108223715
chr16 88847549 88848509 ZNF143 GTRD no Epithelial (MCF-7) 108223716
chr16 88847612 88848108 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737196
chr16 88847612 88848108 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223722
chr16 88847618 88848299 ZNF143 GTRD no Epithelial (MCF-7) 21737197
chr16 88847618 88848299 ZNF143 GTRD no Epithelial (MCF-7) 108223723
chr16 88847618 88848299 ZNF143 GTRD no Epithelial (MCF-7) 108223724
chr16 88847623 88848127 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737198
chr16 88847623 88848127 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223725
chr16 88847651 88848107 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737200
chr16 88847651 88848107 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223727
chr16 88847659 88848246 ZNF274 GTRD no Bone Marrow (K562) 21737201
chr16 88847659 88848246 ZNF274 GTRD no Bone Marrow (K562) 108223728
chr16 88847659 88848246 ZNF274 GTRD no Bone Marrow (K562) 108223729
chr16 88847662 88848212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21737202
chr16 88847662 88848212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223730
chr16 88847662 88848212 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108223731
chr16 88847699 88848243 ZNF274 GTRD no Bone Marrow (K562) 21737205
chr16 88847699 88848243 ZNF274 GTRD no Bone Marrow (K562) 108223734
chr16 88847699 88848243 ZNF274 GTRD no Bone Marrow (K562) 108223735
chr16 88847864 88848171 ZNF274 GTRD no Bone Marrow (K562) 21737206
chr16 88847864 88848171 ZNF274 GTRD no Bone Marrow (K562) 108223736
chr16 88847892 88848242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737207
chr16 88847892 88848242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223737
chr16 88847904 88848408 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737208
chr16 88847904 88848408 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223738
chr16 88847939 88848409 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21737209
chr16 88847939 88848409 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108223739
chr16 88847989 88848589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21737210
chr16 88847989 88848589 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108223740
chr16 88848084 88848103 REST JASPAR yes 12303901
chr16 88848086 88848596 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21737211
chr16 88848086 88848596 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108223741
chr16 88848092 88848096 LFA1 TRANSFAC yes 12303902
Genes associated with rs115928839[chr16:88848093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More