EnhancerDB
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  3. rs115939157[chr6:112292028]
Enhancers that have rs115939157[chr6:112292028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 112291245 112321335 enh23518
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen
Transcript factors that have rs115939157[chr6:112292028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 112292009 112292030 REST JASPAR yes 104392167
chr6 112292010 112292029 REST JASPAR yes 104392168
chr6 112292025 112292038 SMAD2 JASPAR yes 104392170
Genes associated with rs115939157[chr6:112292028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More