EnhancerDB
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  3. rs115943054[chr12:125234430]
Enhancers that have rs115943054[chr12:125234430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115943054[chr12:125234430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125234315 125234860 ZNF274 GTRD no Bone Marrow (K562) 21582737
chr12 125234426 125234439 JUN JASPAR yes 124417429
chr12 125234427 125234442 STAT2 JASPAR yes 124417430
chr12 125234429 125234450 IRF1 JASPAR yes 124417431
Genes associated with rs115943054[chr12:125234430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More