EnhancerDB
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  3. rs115947458[chr1:19713353]
Enhancers that have rs115947458[chr1:19713353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115947458[chr1:19713353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19713346 19713359 SMAD2 JASPAR yes 27183818
chr1 19713349 19713355 GATA3 JASPAR yes 27183819
chr1 19713352 19713360 FOXL1 JASPAR yes 27183820
Genes associated with rs115947458[chr1:19713353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More