EnhancerDB
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  3. rs115954570[chr6:34622356]
Enhancers that have rs115954570[chr6:34622356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34618105 34636675 enh9069
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115954570[chr6:34622356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34622344 34622356 HNF1B JASPAR yes 101228694
chr6 34622351 34622365 POU1F1 JASPAR yes 101228696
chr6 34622351 34622372 IRF1 JASPAR yes 101228697
chr6 34622353 34622368 IRF9 JASPAR yes 101228698
chr6 34622354 34622368 IRF7 JASPAR yes 101228699
chr6 34622354 34622368 IRF8 JASPAR yes 101228700
chr6 34622355 34622369 STAT1 JASPAR yes 101228701
chr6 34622355 34622370 PRDM1 JASPAR yes 101228702
chr6 34622355 34622370 STAT2 JASPAR yes 101228703
chr6 34622356 34622368 IRF1 JASPAR yes 101228704
chr6 34622356 34622371 STAT2 JASPAR yes 101228705
Genes associated with rs115954570[chr6:34622356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More