EnhancerDB
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  3. rs115962888[chr5:173207403]
Enhancers that have rs115962888[chr5:173207403]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115962888[chr5:173207403]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173207394 173207409 STAT1 JASPAR yes 67904179
chr5 173207396 173207407 STAT1 JASPAR yes 67904180
chr5 173207396 173207407 STAT3 JASPAR yes 67904181
chr5 173207399 173207403 H1TF2 TRANSFAC yes 67904182
chr5 173207399 173207403 NFE TRANSFAC yes 67904183
chr5 173207399 173207403 SRF TRANSFAC yes 67904184
chr5 173207403 173207406 MYB TRANSFAC yes 67904185
Genes associated with rs115962888[chr5:173207403], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More