EnhancerDB
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  3. rs116008602[chr1:117411213]
Enhancers that have rs116008602[chr1:117411213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs116008602[chr1:117411213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117411199 117411214 HNF1A JASPAR yes 31846274
chr1 117411200 117411213 HNF1B JASPAR yes 31846276
chr1 117411204 117411214 BARHL2 JASPAR yes 31846277
Genes associated with rs116008602[chr1:117411213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More