EnhancerDB
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  3. rs116034746[chr17:25681245]
Enhancers that have rs116034746[chr17:25681245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116034746[chr17:25681245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245255
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245256
chr17 25680630 25681300 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245307
chr17 25680782 25681991 CTCF UCSC Txn Factor no Conserved 108245395
chr17 25680835 25681331 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747741
chr17 25680835 25681331 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245409
chr17 25681063 25681284 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747752
chr17 25681063 25681284 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245430
chr17 25681201 25681539 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747753
chr17 25681206 25681730 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747754
chr17 25681243 25681257 GLIS3 JASPAR yes 53623674
chr17 25681243 25681258 ZIC3 JASPAR yes 53623675
chr17 25681243 25681258 ZIC4 JASPAR yes 53623676
Genes associated with rs116034746[chr17:25681245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More