EnhancerDB
  1. Home
  2. SNP
  3. rs116073056[chr5:172443245]
Enhancers that have rs116073056[chr5:172443245]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116073056[chr5:172443245]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172443244 172443256 TFAP2A JASPAR yes 67848511
chr5 172443244 172443256 TFAP2B JASPAR yes 67848512
chr5 172443244 172443256 TFAP2C JASPAR yes 67848513
Genes associated with rs116073056[chr5:172443245], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More