EnhancerDB
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  3. rs116079497[chr6:16317002]
Enhancers that have rs116079497[chr6:16317002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16314945 16326043 enh8974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116079497[chr6:16317002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16316981 16317002 IRF1 JASPAR yes 100286432
chr6 16316983 16317003 RREB1 JASPAR yes 100286434
chr6 16316986 16317007 IRF1 JASPAR yes 100286439
chr6 16316987 16317008 IRF1 JASPAR yes 100286440
chr6 16316988 16317008 RREB1 JASPAR yes 100286441
chr6 16316991 16317006 FOXP1 JASPAR yes 100286442
chr6 16316992 16317013 IRF1 JASPAR yes 100286443
chr6 16316994 16317009 IRF9 JASPAR yes 100286444
chr6 16316996 16317011 STAT2 JASPAR yes 100286445
chr6 16316998 16317019 IRF1 JASPAR yes 100286446
chr6 16317000 16317015 IRF9 JASPAR yes 100286447
chr6 16317001 16317015 IRF7 JASPAR yes 100286448
chr6 16317001 16317015 IRF8 JASPAR yes 100286449
chr6 16317002 16317016 STAT1 JASPAR yes 100286450
chr6 16317002 16317017 STAT2 JASPAR yes 100286451
Genes associated with rs116079497[chr6:16317002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More