EnhancerDB
  1. Home
  2. SNP
  3. rs116081390[chr17:56015813]
Enhancers that have rs116081390[chr17:56015813]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116081390[chr17:56015813]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56015275 56015891 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21773905
chr17 56015275 56015891 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108274804
chr17 56015812 56015816 TEAD2 TRANSFAC yes 55002049
chr17 56015813 56015821 OTX2 JASPAR yes 55002050
Genes associated with rs116081390[chr17:56015813], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More