EnhancerDB
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  3. rs116093769[chr17:43390618]
Enhancers that have rs116093769[chr17:43390618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116093769[chr17:43390618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43389140 43391154 POLR2A UCSC Txn Factor no Conserved 108264597
chr17 43389938 43391100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764703
chr17 43390524 43390955 ZNF143 GTRD no Epithelial (MCF-7) 21764710
chr17 43390611 43390619 HOXA5 JASPAR yes 54443308
chr17 43390612 43390622 EN2 JASPAR yes 54443309
chr17 43390612 43390622 GBX1 JASPAR yes 54443310
chr17 43390613 43390621 BSX JASPAR yes 54443311
chr17 43390613 43390621 DLX6 JASPAR yes 54443312
chr17 43390613 43390621 MSX1 JASPAR yes 54443313
chr17 43390613 43390621 MSX2 JASPAR yes 54443314
chr17 43390615 43390625 NFIA JASPAR yes 54443315
chr17 43390617 43390623 NFIC JASPAR yes 54443316
Genes associated with rs116093769[chr17:43390618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More