EnhancerDB
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  3. rs11609872[chr12:116975386]
Enhancers that have rs11609872[chr12:116975386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 116975193 116975459 vista15037
VISTA
Transcript factors that have rs11609872[chr12:116975386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 21577296
chr12 116974346 116976094 AR GTRD no Prostate (PC-3) 108061742
chr12 116974969 116975395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577297
chr12 116974969 116975395 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061743
chr12 116975016 116975606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577298
chr12 116975016 116975606 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061744
chr12 116975087 116975491 RELA UCSC Txn Factor no Conserved 108061745
chr12 116975088 116975524 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577299
chr12 116975088 116975524 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061746
chr12 116975103 116975443 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577300
chr12 116975103 116975443 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061747
chr12 116975106 116975516 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577301
chr12 116975106 116975516 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061748
chr12 116975123 116975453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577302
chr12 116975123 116975453 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061749
chr12 116975124 116975444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577303
chr12 116975124 116975444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061750
chr12 116975128 116975577 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577304
chr12 116975128 116975577 RUNX3 UCSC Txn Factor no Conserved 108061751
chr12 116975128 116975577 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061752
chr12 116975136 116975400 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577305
chr12 116975136 116975400 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061753
chr12 116975141 116975386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577306
chr12 116975141 116975386 SPI1 UCSC Txn Factor no Conserved 108061754
chr12 116975141 116975386 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061755
chr12 116975141 116975421 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577307
chr12 116975141 116975421 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061756
chr12 116975148 116975444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577308
chr12 116975148 116975444 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061757
chr12 116975149 116975446 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577309
chr12 116975149 116975446 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061758
chr12 116975162 116975452 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577310
chr12 116975162 116975452 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061759
chr12 116975170 116975474 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577311
chr12 116975170 116975474 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061760
chr12 116975189 116975819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577312
chr12 116975189 116975819 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061761
chr12 116975190 116975426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577313
chr12 116975190 116975426 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061762
chr12 116975207 116975449 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577315
chr12 116975207 116975449 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061764
chr12 116975246 116975409 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21577317
chr12 116975246 116975409 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108061766
chr12 116975317 116975553 SOX2 GTRD no Neural Stem Cells (H9) 21577319
chr12 116975317 116975553 SOX2 GTRD no Neural Stem Cells (H9) 108061768
chr12 116975374 116975391 ZNF410 JASPAR yes 82484051
chr12 116975374 116975391 ZNF410 JASPAR yes 124008561
chr12 116975376 116975388 GLI2 JASPAR yes 82484052
chr12 116975376 116975388 GLI2 JASPAR yes 124008562
chr12 116975376 116975391 RUNX2 JASPAR yes 82484053
chr12 116975376 116975391 RUNX2 JASPAR yes 124008563
chr12 116975376 116975394 ESR2 JASPAR yes 82484054
chr12 116975376 116975394 ESR2 JASPAR yes 124008564
chr12 116975377 116975386 RUNX2 JASPAR yes 82484055
chr12 116975377 116975386 RUNX2 JASPAR yes 124008565
chr12 116975377 116975387 RUNX3 JASPAR yes 82484056
chr12 116975377 116975387 RUNX3 JASPAR yes 124008566
Genes associated with rs11609872[chr12:116975386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More