EnhancerDB
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  3. rs116102643[chr3:57051162]
Enhancers that have rs116102643[chr3:57051162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 57012585 57055453 enh7240
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116102643[chr3:57051162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 57051159 57051169 GSC2 JASPAR yes 2623149
chr3 57051159 57051169 GSC JASPAR yes 2623150
chr3 57051160 57051168 OTX1 JASPAR yes 2623151
chr3 57051160 57051168 OTX2 JASPAR yes 2623152
chr3 57051160 57051169 PITX3 JASPAR yes 2623153
Genes associated with rs116102643[chr3:57051162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More