EnhancerDB
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  3. rs116115779[chr1:230247932]
Enhancers that have rs116115779[chr1:230247932]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116115779[chr1:230247932]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230247825 230248189 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21391448
chr1 230247825 230248189 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878664
chr1 230247844 230248120 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21391449
chr1 230247844 230248120 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878665
chr1 230247873 230248129 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21391450
chr1 230247873 230248129 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878666
chr1 230247926 230248296 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21391451
chr1 230247926 230248296 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107878667
chr1 230247929 230247939 REL JASPAR yes 36021934
chr1 230247930 230247941 NFKB1 JASPAR yes 36021935
Genes associated with rs116115779[chr1:230247932], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More