EnhancerDB
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  3. rs116117900[chr19:10998284]
Enhancers that have rs116117900[chr19:10998284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116117900[chr19:10998284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10998269 10998284 FOXP1 JASPAR yes 112443455
chr19 10998280 10998295 HNF1A JASPAR yes 112443458
chr19 10998282 10998303 IRF1 JASPAR yes 112443459
Genes associated with rs116117900[chr19:10998284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More