EnhancerDB
  1. Home
  2. SNP
  3. rs116122029[chr1:44009778]
Enhancers that have rs116122029[chr1:44009778]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs116122029[chr1:44009778]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44009528 44011639 TCF7L2 GTRD no Colon (HCT116) 107803030
chr1 44009767 44009782 TFAP2A JASPAR yes 28504195
chr1 44009769 44009784 TFAP2C JASPAR yes 28504196
chr1 44009770 44009782 TFAP2A JASPAR yes 28504197
chr1 44009777 44009781 LFA1 TRANSFAC yes 28504198
Genes associated with rs116122029[chr1:44009778], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More