EnhancerDB
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  3. rs116140246[chr1:234847043]
Enhancers that have rs116140246[chr1:234847043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234827105 234875936 enh12795
Bone Marrow (K562) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116140246[chr1:234847043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234846140 234850353 ZNF274 GTRD no Bone Marrow (K562) 21396143
chr1 234846735 234847416 ZBTB33 GTRD no Brain (SK-N-SH) 21396144
chr1 234846737 234847309 ZBTB33 GTRD no Brain (SK-N-SH) 21396145
chr1 234846802 234847364 ZBTB33 GTRD no Brain (SK-N-SH) 21396146
chr1 234846838 234847302 ZBTB33 GTRD no Brain (SK-N-SH) 21396147
chr1 234846861 234847217 ZBTB33 GTRD no Brain (SK-N-SH) 21396148
chr1 234847034 234847045 FOSL1 JASPAR yes 36305752
chr1 234847039 234847049 RORA JASPAR yes 36305754
chr1 234847040 234847051 ESRRA JASPAR yes 36305755
chr1 234847040 234847051 ESRRB JASPAR yes 36305756
Genes associated with rs116140246[chr1:234847043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More