EnhancerDB
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  3. rs116182659[chr17:43390689]
Enhancers that have rs116182659[chr17:43390689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs116182659[chr17:43390689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43389140 43391154 POLR2A UCSC Txn Factor no Conserved 108264597
chr17 43389938 43391100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764703
chr17 43390524 43390955 ZNF143 GTRD no Epithelial (MCF-7) 21764710
chr17 43390669 43390689 RREB1 JASPAR yes 54443321
chr17 43390670 43390690 RREB1 JASPAR yes 54443322
chr17 43390672 43390692 RREB1 JASPAR yes 54443323
chr17 43390679 43390699 RREB1 JASPAR yes 54443325
chr17 43390688 43391088 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21764711
Genes associated with rs116182659[chr17:43390689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More