EnhancerDB
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  3. rs116185376[chr5:172267570]
Enhancers that have rs116185376[chr5:172267570]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116185376[chr5:172267570]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172267564 172267579 ZIC3 JASPAR yes 67833106
chr5 172267564 172267579 ZIC4 JASPAR yes 67833107
chr5 172267565 172267579 ZIC1 JASPAR yes 67833108
Genes associated with rs116185376[chr5:172267570], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More