EnhancerDB
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  3. rs116188480[chr1:171394434]
Enhancers that have rs116188480[chr1:171394434]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs116188480[chr1:171394434]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171392976 171394439 ZNF143 GTRD no Epithelial (MCF-7) 21349627
chr1 171393268 171394511 ZNF143 GTRD no Epithelial (MCF-7) 21349629
chr1 171393524 171394434 ZNF143 GTRD no Epithelial (MCF-7) 21349633
chr1 171394428 171394440 TEAD1 JASPAR yes 33079099
chr1 171394430 171394440 TEAD1 JASPAR yes 33079100
chr1 171394430 171394440 TEAD4 JASPAR yes 33079101
chr1 171394431 171394439 TEAD3 JASPAR yes 33079102
Genes associated with rs116188480[chr1:171394434], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More